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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTAGAATCATCAACCATGCTCGTCCCAGCAGACTACGTATTCTTTGTGGGGCCCATTTCATTCTCTGGCCCATACTGTAAACCCAGCATCGTTTTCCAGgtaacatatctaacccaaagagagaaagtagcaggaataaacagagagacagagagaaaataataggaaaaataaaaaatgaaaagaaatagaaaagtaa...

Basic information

species Glycine max
transcript GLYMA08G39340.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208109241|gb|GD905769.1|GD905769
EST:     ATTTCATTCTCTGGCCCATACTGTAAACCCAGCATCGTTTTCCAG                         CTTGATGGCACCATTGTTGCACCAACAAGCCCCAATGCTTGGGGCAAAGGA
genomic: ATTTCATTCTCTGGCCCATACTGTAAACCCAGCATCGTTTTCCAGgtaacatatc ... attgtgtcagCTTGATGGCACCATTGTTGCACCAACAAGCCCCAATGCTTGGGGCAAAGGA
EST: gi|193689354|gb|FK630473.1|FK630473
EST:     CATTCTCTGGCCCATACTGTAAACCCAGCATCG-TTTCCAG                         CTTGATGGCACCATTGTTGCACCAACAAGCCCCAATGCTTGGGGCAAAGGA
genomic: CATTCTCTGGCCCATACTGTAAACCCAGCATCGTTTTCCAGgtaacatatc ... attgtgtcagCTTGATGGCACCATTGTTGCACCAACAAGCCCCAATGCTTGGGGCAAAGGA
EST: gi|193609085|gb|FK561109.1|FK561109
EST:     CTGTAAACCCAGCATCGTTTTCCGG                         CTTGATGGCACCATTGTTGCACCAACAAGCCCCAATGCTTGGGGCAAAGGA
genomic: CTGTAAACCCAGCATCGTTTTCCAGgtaacatatc ... attgtgtcagCTTGATGGCACCATTGTTGCACCAACAAGCCCCAATGCTTGGGGCAAAGGA