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GTAATAAGGAAGAGGTTCCGCTTTCTGGCTGTGACTGTGGACTGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcattagatctgcgatttcatttcaatttacgttctcattcagatcccagccggatctattacattacatacgattccgctgattctctaattaaa...
species | Glycine max |
transcript | GLYMA08G24120.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|213618250|gb|DB973020.1|DB973020
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|213618250|gb|DB973020.1|DB973020
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|213618250|gb|DB973020.1|DB973020
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|213598957|gb|DB971957.1|DB971957
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|213598957|gb|DB971957.1|DB971957
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|213598957|gb|DB971957.1|DB971957
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|213598957|gb|DB971957.1|DB971957
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|208112978|gb|GD910617.1|GD910617
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|208112978|gb|GD910617.1|GD910617
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|208112978|gb|GD910617.1|GD910617
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|208112978|gb|GD910617.1|GD910617
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|207842490|gb|GD814692.1|GD814692
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAGCGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|207842490|gb|GD814692.1|GD814692
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAGCGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|207842490|gb|GD814692.1|GD814692
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAGCGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|207842490|gb|GD814692.1|GD814692
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAGCGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AEST: gi|209725685|gb|BW663176.1|BW663176
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaag-
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AAAGAAGGAGTTGCATGCAATGCTGCAAAGAGAATGAATAGGTGAAGTGTCEST: gi|120529403|gb|EH257537.1|EH257537
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaagAAAGAAGGAGTTGCATGCAATGCTGCAAAGAGAATGAATAGGTGAAGTGTC
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AAAGAAGGAGTTGCATGCAATGCTGCAAAGAGAATGAATAGGTGAAGTGTCEST: gi|213588572|gb|DB957636.1|DB957636
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaagAAAGAAGGAGTTGCATGCAATGCTGCAAAGAGAATGAATAGGTGAAGTGTC
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AAAGAAGGAGTTGCATGCAATGCTGCAAAGAGAATGAATAGGTGAAGTGTCEST: gi|213588412|gb|DB959732.1|DB959732
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaagAAAGAAGGAGTTGCATGCAATGCTGCAAAGAGAATGAATAGGTGAAGTGTC
EST: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACC AAAGAAGGAGTTGCATGCAATGCTGCAAAGAGAATGAATAGGTGAAGTGTC
genomic: TGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcatta ... tccggagaagAAAGAAGGAGTTGCATGCAATGCTGCAAAGAGAATGAATAGGTGAAGTGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAATAAGGAAGAGGTTCCGCTTTCTGGCTGTGACTGTGGACTGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCgtaagcattagatctgcgatttcatttcaatttacgttctcattcagatcccagccggatctattacattacatacgattccgctgattctctaattaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccagcc