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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACCAAAATAGTGTGATTCATGGCTGCAACGAATGCGTCAATCTTTGCATCTTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctctctttttatctaatacacgtttatttaatttttattgcatctttgtctacaataatatgttatgttaactttaggatttgctgcaaagaac...

Basic information

species Glycine max
transcript GLYMA08G22740.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22540175|gb|BU090018.1|BU090018
EST:     TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTG                         TTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
genomic: TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctct ... tctcatgcagTTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
EST: gi|209725498|gb|BW677795.1|BW677795
EST:     TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTG                         TTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
genomic: TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctct ... tctcatgcagTTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
EST: gi|17519381|gb|BM188423.1|BM188423
EST:     TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTG                         TTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
genomic: TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctct ... tctcatgcagTTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
EST: gi|17400692|gb|BM177474.1|BM177474
EST:     TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTG                         TTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
genomic: TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctct ... tctcatgcagTTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
EST: gi|10232087|gb|BE800975.1|BE800975
EST:     TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTG                         TTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
genomic: TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctct ... tctcatgcagTTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
EST: gi|20448322|gb|BQ252446.1|BQ252446
EST:     TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTG                         TTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
genomic: TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctct ... tctcatgcagTTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
EST: gi|151400172|gb|EV269986.1|EV269986
EST:     TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTG                         TTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
genomic: TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctct ... tctcatgcagTTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
EST: gi|16105597|gb|BI893337.1|BI893337
EST:     TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTG                         TTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
genomic: TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctct ... tctcatgcagTTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
EST: gi|213608233|gb|DB970830.1|DB970830
EST:     TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTG                         TTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA
genomic: TTCCACGCAATCATGCTTGCCTGTGTCTCCTACCATTTCAAACACGCTTGgtcagtctct ... tctcatgcagTTAGTCCTTTTCTCAATGTTTCGTCACCAAGAAGTTACCTTGTGAAGAAAA