1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CACAAAACATGATAGTGATGGGAAAGGATGTGTCACAATTCTCTTGTGTAGAGAAGAAGGTATTCTCACCCTCTTGTGCAAATCCAGCGGTGTCCAAAAGgtattcctgcttttctctttttttattcaaggctttaaattgtggttatggttttgttgcgatccttaatattaccggaacttgcaggcaaatgtgaccg...
species | Glycine max |
transcript | GLYMA08G21460.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GAGAAGAAGGTATTCTCACCCTCTTGTGCAAATCCAGCGGTGTCCAAAAG AACTTCTTCAGGTCCAGCAGTGGGTTGGCCTCCAATTCGTTCCTTCAGGAAEST: gi|192300225|gb|FG989347.1|FG989347
genomic: GAGAAGAAGGTATTCTCACCCTCTTGTGCAAATCCAGCGGTGTCCAAAAGgtattcctgc ... ccaaaaacagAACTTCTTCAGGTCCAGCAGTGGGTTGGCCTCCAATTCGTTCCTTCAGGAA
EST: GAGAAGAAGGTATTCTCACCCTCTTGTGCAAATCCAGCGGTGTCCAAAAG AACTTCTTCAGGTCCAGCAGTGGGTTGGCCTCCAATTCGTTCCTTCAGGAA
genomic: GAGAAGAAGGTATTCTCACCCTCTTGTGCAAATCCAGCGGTGTCCAAAAGgtattcctgc ... ccaaaaacagAACTTCTTCAGGTCCAGCAGTGGGTTGGCCTCCAATTCGTTCCTTCAGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACAAAACATGATAGTGATGGGAAAGGATGTGTCACAATTCTCTTGTGTAGAGAAGAAGGTATTCTCACCCTCTTGTGCAAATCCAGCGGTGTCCAAAAGgtattcctgcttttctctttttttattcaaggctttaaattgtggttatggttttgttgcgatccttaatattaccggaacttgcaggcaaatgtgaccg
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG