1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GGCAAGCACGGCCATCTCCCTCGTCTTCGCCGCGCTCTTCCTCTTCTCCTCCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttccatttcatttcttctctctttcgattccttcgttacttttcctatattctttgaatttccacgttatatgcttcgtttgtttctcgatca...
species | Glycine max |
transcript | GLYMA08G20640.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCC-TCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAAEST: gi|213608666|gb|DB968953.1|DB968953
genomic: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
EST: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAAEST: gi|298184452|gb|HO029665.1|HO029665
genomic: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
EST: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAAEST: gi|254334786|gb|GR844571.1|GR844571
genomic: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
EST: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAAEST: gi|213617175|gb|DB971294.1|DB971294
genomic: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
EST: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAAEST: gi|208085188|gb|GD883682.1|GD883682
genomic: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
EST: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAAEST: gi|193377803|gb|FK339689.1|FK339689
genomic: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
EST: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAAEST: gi|193312599|gb|FK276565.1|FK276565
genomic: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
EST: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAAEST: gi|193364935|gb|FK333192.1|FK333192
genomic: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
EST: CGTCCACTCTTTCTACCTCCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAAEST: gi|151397256|gb|EV267129.1|EV267129
genomic: CGTCCACTCTTTCTACCT-CCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
EST: CCGTCCACTCTCTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATT GGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
genomic: CCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTTTGTCAAAGTGAACAAGTTATCATCTACCAAGACTCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCAAGCACGGCCATCTCCCTCGTCTTCGCCGCGCTCTTCCTCTTCTCCTCCGTCCACTCTTTCTACCTCCCTGGTGTCGCTCCTCGCGATTTCCAAATTgtacgttttccatttcatttcttctctctttcgattccttcgttacttttcctatattctttgaatttccacgttatatgcttcgtttgtttctcgatca
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