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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCATGATCATGGCTTTCAGGGCTTTAATCAGCTCTCACCAACCCAATTTCTGGTCAGCACTAAGCCCTCTGCTAATGAGAATTTCCTGAACAGTCGAAGGgtaggattgttctgcttttgatctcgcatttttcggttttagtgagggttttcgcagggctgtgccatgaattttgtgtatgcaaatttgttacttaatc...

Basic information

species Glycine max
transcript GLYMA08G18810.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7588627|gb|AW704419.1|AW704419
EST:     TGGTCAGCACTAAGCCCTCTGCTAATGAGAATTTCCTGAACAGTCGAAGG                         AGAAGAAATAGTTTTAACCAAGGAAGGAGAAGGGTGAGTGGAAGATCTCTA
genomic: TGGTCAGCACTAAGCCCTCTGCTAATGAGAATTTCCTGAACAGTCGAAGGgtaggattgt ... tctcttgcagAGAAGAAATAGTTTTAACCAAGGAAGGAGAAGGGTGAGTGGAAGATCTCTA
EST: gi|19934604|gb|BQ079634.1|BQ079634
EST:     TGAGAATTTCCTGAACAGTCGAAGG                         AGAAGAAATAGTTTTAACCAAGGAAGGAGAAGGGTGAGTGGAAGATCTCTA
genomic: TGAGAATTTCCTGAACAGTCGAAGGgtaggattgt ... tctcttgcagAGAAGAAATAGTTTTAACCAAGGAAGGAGAAGGGTGAGTGGAAGATCTCTA