1 5' 3' | 2 5' 3' | 3 5' 3' |
TCTCTTCGCGATCGCTGCTTCCAAAGAGAACAAGTTGAAGAGCGCACACTCGTCGCATAGCTCTTAATAATTGCAGAATGAAGAAGGCAGACACAACGAGgtaaaatttgggttaccacaaaattatatatatatatatatataaaagcccttcttgaagcttggatgttagttgtttgtcaatatcttttttccccctc...
species | Glycine max |
transcript | GLYMA08G18320.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGTCGCATAGCTCTTAATAATTGCAGAATGAAGAAGGCAGACACAACGAG ATTAAGGTAGCTGGCAGACTAAAGGGTTTCATGGCAGGCAGTGGCCTGCCAEST: gi|10846835|gb|BF069576.1|BF069576
genomic: CGTCGCATAGCTCTTAATAATTGCAGAATGAAGAAGGCAGACACAACGAGgtaaaatttg ... acctgtctagATTAAGGTAGCTGGCAGACTAAAGGGTTTCATGGCAGGCAGTGGCCTGCCA
EST: CGTCGCATAGCTCTTAATAATTGCAGAATGAAGAAGGCAGACACAACGAG ATTAAGGTAGCTGGCAGACTAAAGGGTTTCATGGCAGGCAGTGGCCTGCCA
genomic: CGTCGCATAGCTCTTAATAATTGCAGAATGAAGAAGGCAGACACAACGAGgtaaaatttg ... acctgtctagATTAAGGTAGCTGGCAGACTAAAGGGTTTCATGGCAGGCAGTGGCCTGCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTCTTCGCGATCGCTGCTTCCAAAGAGAACAAGTTGAAGAGCGCACACTCGTCGCATAGCTCTTAATAATTGCAGAATGAAGAAGGCAGACACAACGAGgtaaaatttgggttaccacaaaattatatatatatatatatataaaagcccttcttgaagcttggatgttagttgtttgtcaatatcttttttccccctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttccccc