1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
ACTCAGATCACTACCACCAGCAACTTCCCCGAGTGTTGTTTTTCACTTTCTCTTCTCAAAACCCACTCTCTCTGCCAGATCTTGCTTCCTGTTGTTCCAGgtgctctcctctttctcccctctcgattgtcttttacagtttttagaattcatttttatatattattcttccatttgcattaatttatttgtcatttggt...
species | Glycine max |
transcript | GLYMA08G14040.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCTTCTCAAAACCCACTCTCTCTGCCAGATCTTGCTTCCTGTTGTTCCAG GGACTGTTTTCTTATAACAAGTATCTTTGCTTCTAATAAGGAGCGTACATGEST: gi|193384282|gb|FK349308.1|FK349308
genomic: TCTTCTCAAAACCCACTCTCTCTGCCAGATCTTGCTTCCTGTTGTTCCAGgtgctctcct ... ctttgtacagGGACTGTTTTCTTATAACAAGTATCTTTGCTTCTAATAAGGAGCGTACATG
EST: CCAGATCTTGCTTCCTGTTGTTCCAG GGACTGTTTTCTTATAACAAGTATCTTTGCTTCTAATAAGGAGCGTACATGEST: gi|37996138|gb|CF807727.1|CF807727
genomic: CCAGATCTTGCTTCCTGTTGTTCCAGgtgctctcct ... ctttgtacagGGACTGTTTTCTTATAACAAGTATCTTTGCTTCTAATAAGGAGCGTACATG
EST: TCTTCTCAAAACCCACTCTCTCTGCCAGATCTTGCTTCCTGTTGTTCCAG GGACTGTTTTCTTATAACAAGTATCTTTGCTTCTAATAAGGAGCGTACATG
genomic: TCTTCTCAAAACCCACTCTCTCTGCCAGATCTTGCTTCCTGTTGTTCCAGgtgctctcct ... ctttgtacagGGACTGTTTTCTTATAACAAGTATCTTTGCTTCTAATAAGGAGCGTACATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTCAGATCACTACCACCAGCAACTTCCCCGAGTGTTGTTTTTCACTTTCTCTTCTCAAAACCCACTCTCTCTGCCAGATCTTGCTTCCTGTTGTTCCAGgtgctctcctctttctcccctctcgattgtcttttacagtttttagaattcatttttatatattattcttccatttgcattaatttatttgtcatttggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcccct