1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATAAAGGCCAAGTCTTCAAAATCTCATCTTTTTCTCCACTTTTTTATCCAATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAGgtgcgtgcgtttcccctttatttctggaatcttattgaattggtttattgtttcggtgctcagaatgacagaaacttgagtcacacctgaagaaaaagag...
species | Glycine max |
transcript | GLYMA08G12370.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAG ATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATAEST: gi|15287293|gb|BI471184.1|BI471184
genomic: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAGgtgcgtgcgt ... aacttgacagATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATA
EST: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAG ATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATAEST: gi|207735962|gb|GD709825.1|GD709825
genomic: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAGgtgcgtgcgt ... aacttgacagATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATA
EST: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAG ATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATAEST: gi|193371527|gb|FK335948.1|FK335948
genomic: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAGgtgcgtgcgt ... aacttgacagATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATA
EST: CCCACTCCCACTTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAG ATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATAEST: gi|209727967|gb|BW666687.1|BW666687
genomic: CCCA-TCCCA-TTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAGgtgcgtgcgt ... aacttgacagATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATA
EST: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAG ATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATAEST: gi|193377446|gb|FK339262.1|FK339262
genomic: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAGgtgcgtgcgt ... aacttgacagATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATA
EST: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAG ATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATAEST: gi|193301338|gb|FK266427.1|FK266427
genomic: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAGgtgcgtgcgt ... aacttgacagATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATA
EST: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAG ATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATA
genomic: ATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAGgtgcgtgcgt ... aacttgacagATATCCACTTCCGCTGATGATGGTAATGATTCTCTGAATGGTCACATCATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAAAGGCCAAGTCTTCAAAATCTCATCTTTTTCTCCACTTTTTTATCCAATCCCATCCCATTAACGTCCTCTTACCTCATGTCAGATCACAACCACGAGgtgcgtgcgtttcccctttatttctggaatcttattgaattggtttattgtttcggtgctcagaatgacagaaacttgagtcacacctgaagaaaaagag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tttcccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagaaaaa