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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACACTTAATTCACCATGGTTTTTCCAAAACCCGCTTCTGAGTCTGATCTCTTTCTTCATTCCAACTTTGCTTCTCGTTATGCCAGGGACTCTCTTCCCAGgtttatatttacattttgcttctcattttcccttcttcatcatgcctcttccttttgttatgtccattgaatgtaatttatcttatttgacttcaacatagtattatttaatttgattttctttgtgagaggtaattaatcaatgaagtgttgttttggtgatgcag

Basic information

species Glycine max
transcript GLYMA08G09660.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120530519|gb|EH258652.1|EH258652
EST:     TTTCTTCATTCCAACTTTGCTTCTCGTTATGCCAGGGACTCTCTTCCCAG                         GTTCAGCATACCCGAGGACTCCATGCCAAAGGAGGCTGCGTATCAGAACAT
genomic: TTTCTTCATTCCAACTTTGCTTCTCGTTATGCCAGGGACTCTCTTCCCAGgtttatattt ... ggtgatgcagGTTCAGCATACCCGAGGACTCCATGCCAAAGGAGGCTGCGTATCAGAACAT