1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTTCGATTCAGATCCAGATTCATGGGGATTTGCTTCAGCATTGAAGACCCAAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAGgtaacttcaatttccgattcgatccaaacccaaacgaaccgttttctttgccttcatcgattaacgttaatcaatcgtcgtatgaaaaatttgatgagtag
species | Glycine max |
transcript | GLYMA08G03070.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAG GTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCGEST: gi|298191005|gb|HO038484.1|HO038484
genomic: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAGgtaacttcaa ... tgatgagtagGTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCG
EST: AAACAACCTCTCCACCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAG GTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCGEST: gi|213587175|gb|DB959554.1|DB959554
genomic: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAGgtaacttcaa ... tgatgagtagGTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCG
EST: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAG GTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCGEST: gi|213589643|gb|DB965831.1|DB965831
genomic: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAGgtaacttcaa ... tgatgagtagGTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCG
EST: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAG GTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCANAGATCTCCGCGEST: gi|192326778|gb|FK018905.1|FK018905
genomic: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAGgtaacttcaa ... tgatgagtagGTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCG
EST: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAG GTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCGEST: gi|20813131|gb|BQ297609.1|BQ297609
genomic: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAGgtaacttcaa ... tgatgagtagGTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCG
EST: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAG GTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCGEST: gi|209705556|gb|BW673550.1|BW673550
genomic: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAGgtaacttcaa ... tgatgagtagGTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCG
EST: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAG GTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCNAAGATCTCCGCG
genomic: AAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAGgtaacttcaa ... tgatgagtagGTCATGAATCTGGCGCTCCATTGGCTTCCATGAATATCAAAGATCTCCGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCGATTCAGATCCAGATTCATGGGGATTTGCTTCAGCATTGAAGACCCAAACAACCTCTCCATCTCCGATTCGAACGCCAAGCCTAATAAACCTGCAGgtaacttcaatttccgattcgatccaaacccaaacgaaccgttttctttgccttcatcgattaacgttaatcaatcgtcgtatgaaaaatttgatgagtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG