1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GACATGGATCAGGTCATCAGGATGATGAGTGATTACAAGGTGGAGACGGTCAACGATGGCATGCAAGAGTTCTTTGTGGAATTCCACGGACCCAAAGACAgtaaatttttgcaaccctttgtgtcattttatttccaattattattttttgttcagttcttggttgagatagtgttgttctatttggtgcaacttttaat...
species | Glycine max |
transcript | GLYMA08G01940.4 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CAACGATGGCATGCAAGAGTTCTTTGTGGAATTCCACGGACCCAAAGACA GTCCTTATCAAGGTGGTGTGTGGAAAGTAAGGGTGGATCTACCTGATGCCTEST: gi|208327891|gb|GE119403.1|GE119403
genomic: CAACGATGGCATGCAAGAGTTCTTTGTGGAATTCCACGGACCCAAAGACAgtaaattttt ... tcgtgtgcagGTCCTTATCAAGGTGGTGTGTGGAAAGTAAGGGTGGATCTACCTGATGCCT
EST: CAACGATGGCATGCAAGAGTTCTTTGTGGAATTCCACGGACCCAAAGACA GTCCTTATCAAGGTGGTGTGTGGAAAGTAAGGGTGGATCTACCTGATGCCTEST: gi|298163300|gb|HO012033.1|HO012033
genomic: CAACGATGGCATGCAAGAGTTCTTTGTGGAATTCCACGGACCCAAAGACAgtaaattttt ... tcgtgtgcagGTCCTTATCAAGGTGGTGTGTGGAAAGTAAGGGTGGATCTACCTGATGCCT
EST: CAACGATGGCATGCAAGAGTTCTTTGTGGAATTCCACGGACCCAAAGACA GTCCTTATCAAGGTGGTGTGTGGAAAGTAAGGGTGGATCTACCTGATGCCT
genomic: CAACGATGGCATGCAAGAGTTCTTTGTGGAATTCCACGGACCCAAAGACAgtaaattttt ... tcgtgtgcagGTCCTTATCAAGGTGGTGTGTGGAAAGTAAGGGTGGATCTACCTGATGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACATGGATCAGGTCATCAGGATGATGAGTGATTACAAGGTGGAGACGGTCAACGATGGCATGCAAGAGTTCTTTGTGGAATTCCACGGACCCAAAGACAgtaaatttttgcaaccctttgtgtcattttatttccaattattattttttgttcagttcttggttgagatagtgttgttctatttggtgcaacttttaat
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