1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GGATTTGGCATTTGCTGCAAGTTGTATTATAGGTTGAGTTGAATATTAAGgtagtaagatgagacgtcaagtttggatctctatctcattgttgatttagtattaaatttctatgtagttgttgtttgtagtaatcatcaactcactcag
species | Glycine max |
transcript | GLYMA08G00740.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCTGCAAGTTGTATTATAGGTTGAGTTGAATATTAAG TTGCCGTAGGTTGTCGTGATCCATCACAACACTTTGTCACTGAAATTCAGAEST: gi|209714515|gb|BW684878.1|BW684878
genomic: GCTGCAAGTTGTATTATAGGTTGAGTTGAATATTAAGgtagtaagat ... actcactcagTTGCCGTAGGTTGTCGTGATCCATCACAACACTTTGTCACTGAAATTCAGA
EST: GGATTTGGCATTTGCTGCAAGTTGTATTATAGGTTGAGTTGAATATTAAG TTGCCGTAGGTTGTCGTGATCCATCACAACACTTTGTCACTGAAATTCAGA
genomic: GGATTTGGCATTTGCTGCAAGTTGTATTATAGGTTGAGTTGAATATTAAGgtagtaagat ... actcactcagTTGCCGTAGGTTGTCGTGATCCATCACAACACTTTGTCACTGAAATTCAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATTTGGCATTTGCTGCAAGTTGTATTATAGGTTGAGTTGAATATTAAGgtagtaagatgagacgtcaagtttggatctctatctcattgttgatttagtattaaatttctatgtagttgttgtttgtagtaatcatcaactcactcag
- - - - - - TGCTGC