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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAAACAGCCGCATCGACCACGAACTCCCTCTCCCCTCCGTTCTCAAAAACCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGgtctcgcttcctcccatttgcttcttcaattttccgttaacaattccagttgtatgtaattttgaagtcctctctctctcttgcag

Basic information

species Glycine max
transcript GLYMA07G39380.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254318249|gb|GR832417.1|GR832417
EST:     CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTG                         AGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT
genomic: CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGgtctcgcttc ... tctcttgcagAGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT
EST: gi|193570764|gb|FK529475.1|FK529475
EST:     CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTG                         AGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACC
genomic: CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGgtctcgcttc ... tctcttgcagAGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACC
EST: gi|207700556|gb|GD683663.1|GD683663
EST:     CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTG                         AGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT
genomic: CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGgtctcgcttc ... tctcttgcagAGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT
EST: gi|254323780|gb|GR836119.1|GR836119
EST:     CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTG                         AGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT
genomic: CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGgtctcgcttc ... tctcttgcagAGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT
EST: gi|213599182|gb|DB958401.1|DB958401
EST:     CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTG                         AGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT
genomic: CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGgtctcgcttc ... tctcttgcagAGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT
EST: gi|193388168|gb|FK353879.1|FK353879
EST:     CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACC-TG                         AGGAGATCGCGAAGCTGTT
genomic: CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGgtctcgcttc ... tctcttgcagAGGAGATCGCGAAGCTGTT
EST: gi|208194728|gb|GD989355.1|GD989355
EST:     CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTG                         AGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT
genomic: CCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGgtctcgcttc ... tctcttgcagAGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTT