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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTGAGACCTCAGTTTGTGCTCTTTGGTTCTTCCATTGTTCAGCTCAGTTACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacctttcatttctccttaaaactttgaacttttaaacctctcttactgtctcatactcattatggtttcaatctgtgaatcaaactgtgaacg...

Basic information

species Glycine max
transcript GLYMA07G18210.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151406549|gb|EV276364.1|EV276364
EST:     ACTCTCTCCAGGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|298171010|gb|HO016042.1|HO016042
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|151398511|gb|EV268382.1|EV268382
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|7591301|gb|AW707037.1|AW707037
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|15815106|gb|BI787381.1|BI787381
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|298169237|gb|HO020597.1|HO020597
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|151404433|gb|EV274247.1|EV274247
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|208254011|gb|GE055989.1|GE055989
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|192327728|gb|FK022035.1|FK022035
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|151411903|gb|EV281714.1|EV281714
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|15813377|gb|BI785652.1|BI785652
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|151394124|gb|EV263995.1|EV263995
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|298189599|gb|HO038002.1|HO038002
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|13478430|gb|BG507910.1|BG507910
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
EST: gi|19053011|gb|BM731678.1|BM731678
EST:     ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAG                         GCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG
genomic: ACTCTCTCCAAGGTTGGGGCGCTATTCTTGCTCATTTGTATGCTCGCAAGgtatgctacc ... catgacatagGCGGATATAATTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTGTG