1 5' 3' | 2 5' 3' | 3 5' 3' |
CTATGGCAGGAGCAGAAGGGTTCGTTGAAGCAGATAATGCAGAGGCCATAATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAgtactttcccttttcttcttctctctttatttcaaacacatcacttgttccttttctgacgaacgaatcaatttacttgttttcttaagaaaataaaatttttaaagtgattattattatttgctcttatggtctgtactgtgatgcaatttcag
species | Glycine max |
transcript | GLYMA07G14260.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACA GTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGATEST: gi|298165164|gb|HO011213.1|HO011213
genomic: ATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAgtactttccc ... gcaatttcagGTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGAT
EST: ATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACA GTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGATEST: gi|12690291|gb|BG156627.1|BG156627
genomic: ATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAgtactttccc ... gcaatttcagGTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGAT
EST: ATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACA GTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGATEST: gi|193566533|gb|FK522478.1|FK522478
genomic: ATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAgtactttccc ... gcaatttcagGTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGAT
EST: TACCAGAA-TGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACA GTATAAGCCCGTGG-AGCCCTT-AAACTGCCCTTGAAGGCACATATGCGAT
genomic: TACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAgtactttccc ... gcaatttcagGTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATGGCAGGAGCAGAAGGGTTCGTTGAAGCAGATAATGCAGAGGCCATAATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAgtactttcccttttcttcttctctctttatttcaaacacatcacttgttccttttctgacgaacgaatcaatttacttgttttcttaagaaaataaaatttttaaagtgattattattatttgctcttatggtctgtactgtgatgcaatttcag
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