1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CACTCTGCTTCACTCCGCATCAACTTCTTCTCCTTCCTTCTCTCAGATCACCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCgtaagtcaaaacctctcattcctcttcgtttcgattttctcctttttctttatctatttattattcactcggaagtgtttgatgaaatgcgcgtttgataaccgaacggagaatttgttttcag
species | Glycine max |
transcript | GLYMA07G12660.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTC CGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCGEST: gi|298185832|gb|HO030993.1|HO030993
genomic: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCgtaagtcaaa ... ttgttttcagCGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCG
EST: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTC CGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCGEST: gi|4313916|gb|AI461035.1|AI461035
genomic: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCgtaagtcaaa ... ttgttttcagCGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCG
EST: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTC CGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCGEST: gi|27446243|gb|CA953366.1|CA953366
genomic: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCgtaagtcaaa ... ttgttttcagCGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCG
EST: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTC CGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCGEST: gi|16997052|gb|BM086424.1|BM086424
genomic: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCgtaagtcaaa ... ttgttttcagCGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCG
EST: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTC CGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCGEST: gi|209708416|gb|BW665391.1|BW665391
genomic: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCgtaagtcaaa ... ttgttttcagCGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCG
EST: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTC CGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCG
genomic: CCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCgtaagtcaaa ... ttgttttcagCGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACTCTGCTTCACTCCGCATCAACTTCTTCTCCTTCCTTCTCTCAGATCACCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCgtaagtcaaaacctctcattcctcttcgtttcgattttctcctttttctttatctatttattattcactcggaagtgtttgatgaaatgcgcgtttgataaccgaacggagaatttgttttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC