1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CGAGAGGCACTGCCCGCCGCTCGAGACCTCGCCGCTCTGCCTCGTTCCGCCGCCGAAGGGATACAAGGTGCCGGTGCAGTGGCCGGAGAGCTTGCACAAGgtacggggaatgcagaatgctgttgtttatttgttaattttgagattcttggactgttaactaattagaactctgcataaatgttttttacattgttaac...
species | Glycine max |
transcript | GLYMA07G08360.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGCCGAAGGGATACAAGGTGCCGGTGCAGTGGCCGGAGAGCTTGCACAAG ATATGGCACAGCAACATGCCATACAACAAGATTGCTGACAGGAAAGGTCACEST: gi|10709365|gb|BF009089.1|BF009089
genomic: CGCCGAAGGGATACAAGGTGCCGGTGCAGTGGCCGGAGAGCTTGCACAAGgtacggggaa ... attcatgtagATATGGCACAGCAACATGCCATACAACAAGATTGCTGACAGGAAAGGTCAC
EST: GGAGAGCTTGCACAAG ATATGGCACAGCAACATGCCATACAACAAGATTGCTGACAGGAAAGGTCACEST: gi|10709421|gb|BF009145.1|BF009145
genomic: GGAGAGCTTGCACAAGgtacggggaa ... attcatgtagATATGGCACAGCAACATGCCATACAACAAGATTGCTGACAGGAAAGGTCAC
EST: GGAGAGCTTGCACAAG ATATGGCACAGCAACATGCCATACAACAAGATTGCTGACAGGAAAGGTCAC
genomic: GGAGAGCTTGCACAAGgtacggggaa ... attcatgtagATATGGCACAGCAACATGCCATACAACAAGATTGCTGACAGGAAAGGTCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGAGAGGCACTGCCCGCCGCTCGAGACCTCGCCGCTCTGCCTCGTTCCGCCGCCGAAGGGATACAAGGTGCCGGTGCAGTGGCCGGAGAGCTTGCACAAGgtacggggaatgcagaatgctgttgtttatttgttaattttgagattcttggactgttaactaattagaactctgcataaatgttttttacattgttaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT