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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGAAACAGAATTGAATTGAATTGAATTGCGTTTGCGCCATTGAAAATCGGAAGTAATGGAATTGCATTGCTCCGTGAAAAAATTGGAAAACGAGAAAGgtgagttgagttccaatgagcgcaaaaagagaaatcatgaaatgacacagtgtttggtatcttctcgtttttttagaaagcaatgaagacatgacgatggagattttttttttggttggtttttggtttgatgtttttggatttttgtaatttgcag

Basic information

species Glycine max
transcript GLYMA07G07770.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209703094|gb|BW664644.1|BW664644
EST:     GGAAGTAATGGAATTGCATTGCTCCGTGAAAAAATTGGAAAACGAGAAAG                         CGTTTGAGTTTCTCGGAGGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGT
genomic: GGAAGTAATGGAATTGCATTGCTCCGTGAAAAAATTGGAAAACGAGAAAGgtgagttgag ... taatttgcagCGTTTGAGTTTCTCGGAGGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGT
EST: gi|7684702|gb|AW755350.1|AW755350
EST:     GGAAGTAATGGAATTGCATTGCTCCGTGAAAAAATTGGAAAACGAGAAAG                         CGTTTGAGTTTCTCGGAGGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGT
genomic: GGAAGTAATGGAATTGCATTGCTCCGTGAAAAAATTGGAAAACGAGAAAGgtgagttgag ... taatttgcagCGTTTGAGTTTCTCGGAGGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGT
EST: gi|298175909|gb|HO015314.1|HO015314
EST:     GGAAGTAATGGAATTGCATTGCTCCGTGAAAAAATTGGAAAACGAGAAAG                         CGTTTGAGTTTCTCGGAGGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGT
genomic: GGAAGTAATGGAATTGCATTGCTCCGTGAAAAAATTGGAAAACGAGAAAGgtgagttgag ... taatttgcagCGTTTGAGTTTCTCGGAGGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGT