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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCTGCTTGATCGGATCTGCCACCCAACGAACCCTAATCATTCTTCCCTCCTTCTCTTTCGATTAACATGGCATCTCATTTACTCAATCACTCGTCCAAGgtcaatcaattccacgattctcgcttttacacacccacaaaagcacatttttatttaatgctatgtattggtttcag

Basic information

species Glycine max
transcript GLYMA07G03930.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213616567|gb|DB965737.1|DB965737
EST:     CTTCTCTTTCGATTAACATGGCATCTCATTTACTCAATCACTCGTCCAAG                         ATGAGAAATGCTTCCAAGTTGCTGCACCACGAACGCGCTCTTTTGGTTCGT
genomic: CTTCTCTTTCGATTAACATGGCATCTCATTTACTCAATCACTCGTCCAAGgtcaatcaat ... ttggtttcagATGAGAAATGCTTCCAAGTTGCTGCACCACGAACGCGCTCTTTTGGTTCGT
EST: gi|19269403|gb|BM885659.1|BM885659
EST:     CTTCTCTTTCGATTAACATGGCATCTCATTTACTCAATCACTCGTCCAAG                         ATGAGAAATGCTTCCAAGTTGCTGCACCACGAACGCGCTCTTTTGGTTCGT
genomic: CTTCTCTTTCGATTAACATGGCATCTCATTTACTCAATCACTCGTCCAAGgtcaatcaat ... ttggtttcagATGAGAAATGCTTCCAAGTTGCTGCACCACGAACGCGCTCTTTTGGTTCGT
EST: gi|209714755|gb|BW654105.1|BW654105
EST:     CTTCTCTTTCGATTAACATGGCATCTCATTTACTCAATCACTCGTCCAAG                         ATGAGAAATGCTTCCAAGTTGCTGCACCACGAACGCGCTCTTTTGGTTCGT
genomic: CTTCTCTTTCGATTAACATGGCATCTCATTTACTCAATCACTCGTCCAAGgtcaatcaat ... ttggtttcagATGAGAAATGCTTCCAAGTTGCTGCACCACGAACGCGCTCTTTTGGTTCGT