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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCGCCGCCGCCGCCGCCACCGCCACTCCCCGATCTGCTTCCGCCTCCGCCAGATTCGCCGCTCTCTCTCGCTCCTGCCTCTACTTCTCAACCCAATCCGgtactctctcctttttcttctcattcactatttcctaaatccgccagatgaactcatcttatctcttcttacag

Basic information

species Glycine max
transcript GLYMA07G03680.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31476276|gb|CD418304.1|CD418304
EST:     CAGATTCGCCGCTCTCTCTCGCTCCTGCCTCTACTTCTCAACCCAATCCG                         AGGATGCTACTGCGATCAAAAAGAAGGTTGAGGACATAATGCCAATCGCTA
genomic: CAGATTCGCCGCTCTCTCTCGCTCCTGCCTCTACTTCTCAACCCAATCCGgtactctctc ... cttcttacagAGGATGCTACTGCGATCAAAAAGAAGGTTGAGGACATAATGCCAATCGCTA
EST: gi|58024911|gb|CX711652.1|CX711652
EST:     TCAACCCAATCCG                         AGGATGCTACTGCGATCAAAAAGAAGGTTGAGGACATAATGCCAATCGCTA
genomic: TCAACCCAATCCGgtactctctc ... cttcttacagAGGATGCTACTGCGATCAAAAAGAAGGTTGAGGACATAATGCCAATCGCTA
EST: gi|14126582|gb|BG791020.1|BG791020
EST:     CAGATTCGCCGCTCTCTCTCGCTCCTGCCTCTACTTCTCAACCCAATCCG                         AGGATGCTACTGCGATCAAAAAGAAGGTTGAGGACATAATGCCAATCGCTA
genomic: CAGATTCGCCGCTCTCTCTCGCTCCTGCCTCTACTTCTCAACCCAATCCGgtactctctc ... cttcttacagAGGATGCTACTGCGATCAAAAAGAAGGTTGAGGACATAATGCCAATCGCTA