1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GGCAAGCACCGCCATCTCCGTCGTCTTCGCCGCGCTCTTCCTCTTCTCCTCCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATTgtacgttttccatttcttttctcttctctctctctctctcgattcgttcgttacttttcatctcttatctgaatttctacgttatatgcttcgttcgttt...
species | Glycine max |
transcript | GLYMA07G01240.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATT GGTGACCCCCTCTCTGTCAAAGTGAACAAGTTATCATCCACCAAGACTCAAEST: gi|208150432|gb|GD946963.1|GD946963
genomic: CCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTCTGTCAAAGTGAACAAGTTATCATCCACCAAGACTCAA
EST: CCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATT GGTGACCCCCTCTCTGTCAAAGTGAACAAGTTATCATCCACCAAGACTCAAEST: gi|213592925|gb|DB966030.1|DB966030
genomic: CCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTCTGTCAAAGTGAACAAGTTATCATCCACCAAGACTCAA
EST: CCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATT GGTGACCCCCTCTCTGTCAAAGGGAACAAGTTATCATCCACCAAGACTCAAEST: gi|192310001|gb|FK000621.1|FK000621
genomic: CCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTCTGTCAAAGTGAACAAGTTATCATCCACCAAGACTCAA
EST: CCGTCCACTCCTTCTACCTCCCCGGCGTCGTTCCTCGCGATTTTCAAATT GGTGACCCCCTCTCTGTCAAAGTGAACAAGTTATCATCCACCAAGACTCAA
genomic: CCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATTgtacgttttc ... gtggcaccagGGTGACCCCCTCTCTGTCAAAGTGAACAAGTTATCATCCACCAAGACTCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCAAGCACCGCCATCTCCGTCGTCTTCGCCGCGCTCTTCCTCTTCTCCTCCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATTgtacgttttccatttcttttctcttctctctctctctctcgattcgttcgttacttttcatctcttatctgaatttctacgttatatgcttcgttcgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctc