1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AGATTTCCCTCAACCGTGGCATGAGCCACTATGTCCTCGTTGTTTATCGTCATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAGgttcatacaacaaccacccaccctagaaagtcataataagttttttgtgccttttcaaaaaaagtttttttgttttgtttatgcaattaaaagcatcacaaattaatgctaatgcattgtttcaatttcacag
species | Glycine max |
transcript | GLYMA06G46740.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAG GAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCEST: gi|209723499|gb|BW669502.1|BW669502
genomic: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAGgttcatacaa ... aatttcacagGAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATC
EST: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAG GAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCTEST: gi|19453389|gb|BM954799.1|BM954799
genomic: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAGgttcatacaa ... aatttcacagGAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCT
EST: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAG GAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCTEST: gi|213594520|gb|DB973677.1|DB973677
genomic: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAGgttcatacaa ... aatttcacagGAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCT
EST: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAG GAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCTEST: gi|209710126|gb|BW681066.1|BW681066
genomic: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAGgttcatacaa ... aatttcacagGAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCT
EST: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAG GAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCT
genomic: CATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAGgttcatacaa ... aatttcacagGAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGATTTCCCTCAACCGTGGCATGAGCCACTATGTCCTCGTTGTTTATCGTCATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAGgttcatacaacaaccacccaccctagaaagtcataataagttttttgtgccttttcaaaaaaagtttttttgttttgtttatgcaattaaaagcatcacaaattaatgctaatgcattgtttcaatttcacag
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