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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGATTCTTCTTATTTCTCCACTTGCTGCCACTGGGGTGATTCGTCTTCATCCTTCATCGGCATTGCGCTTCACAAATTCTCAGTCTACGACTTGGGTGTgtatgtattcatttctgcttagagttcaaaagcctccgtttttttattattatttatatacttgcttgttccaattcatcactttctcttaatttgagtt...

Basic information

species Glycine max
transcript GLYMA06G21080.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192318789|gb|FK008001.1|FK008001
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192318789|gb|FK008001.1|FK008001
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192318789|gb|FK008001.1|FK008001
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192318789|gb|FK008001.1|FK008001
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|151400100|gb|EV269914.1|EV269914
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|151400100|gb|EV269914.1|EV269914
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|151400100|gb|EV269914.1|EV269914
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|151400100|gb|EV269914.1|EV269914
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192318790|gb|FK008002.1|FK008002
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192318790|gb|FK008002.1|FK008002
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192318790|gb|FK008002.1|FK008002
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192318790|gb|FK008002.1|FK008002
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|213614928|gb|DB957008.1|DB957008
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|213614928|gb|DB957008.1|DB957008
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|213614928|gb|DB957008.1|DB957008
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|213614928|gb|DB957008.1|DB957008
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192327814|gb|FK022079.1|FK022079
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192327814|gb|FK022079.1|FK022079
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192327814|gb|FK022079.1|FK022079
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|192327814|gb|FK022079.1|FK022079
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|58015222|gb|CX701964.1|CX701964
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|58015222|gb|CX701964.1|CX701964
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|58015222|gb|CX701964.1|CX701964
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
EST: gi|58015222|gb|CX701964.1|CX701964
EST:     AG                         TTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG
genomic: --gtatgtattc ... tttcattaagTTGTGATAAACATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAG