1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CATGGAGATGGAGCGCATCGTTGAATTCCCTCACACATACATGGATCGACCCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAGgtaaacaatctccatcctaaaatgtcagatctcgtgtttttttgaggttgttttatgtctcttgttgtagatctggtggattttgtgtattttaggtttg...
species | Glycine max |
transcript | GLYMA06G18530.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAG GCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTTEST: gi|192330547|gb|FK021250.1|FK021250
genomic: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAGgtaaacaatc ... ctgtgtgtagGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTT
EST: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAG GCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTTEST: gi|298183614|gb|HO028827.1|HO028827
genomic: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAGgtaaacaatc ... ctgtgtgtagGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTT
EST: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAG GCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCGAGCTTTEST: gi|298177034|gb|HO023395.1|HO023395
genomic: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAGgtaaacaatc ... ctgtgtgtagGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTT
EST: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAG GCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTTEST: gi|10237570|gb|BE806458.1|BE806458
genomic: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAGgtaaacaatc ... ctgtgtgtagGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTT
EST: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAG GCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTTEST: gi|17518727|gb|BM187769.1|BM187769
genomic: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAGgtaaacaatc ... ctgtgtgtagGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTT
EST: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAG GCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTT
genomic: CCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAGgtaaacaatc ... ctgtgtgtagGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGGAGATGGAGCGCATCGTTGAATTCCCTCACACATACATGGATCGACCCCCGAGAAAGAGAGCGCGTTTGGGCTGGGACATCGCTGAGGTCCCCAAGgtaaacaatctccatcctaaaatgtcagatctcgtgtttttttgaggttgttttatgtctcttgttgtagatctggtggattttgtgtattttaggtttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctccatc