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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAACACAAACCCATATCCCCAAAACCTGTGTCTGTCAACTGCACTTAGAGAGAGTGAGTGACGCAACCAGACTAGCACGCACAACACACAATAACTGCATgtaagatagattattctctaaaccctagctagcatcctctgatttcatctttctctgtttctgaagtttgcttttccgtattgtttgatttag

Basic information

species Glycine max
transcript GLYMA06G15380.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298190263|gb|HO032384.1|HO032384
EST:     AGAGTGAGTGACGCAACCAGACTAGCACGCACAACACACAATAACTGCAT                         ATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCAGAGACTCCTATAAAC
genomic: AGAGTGAGTGACGCAACCAGACTAGCACGCACAACACACAATAACTGCATgtaagataga ... tttgatttagATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCAGAGACTCCTATAAAC
EST: gi|254343935|gb|GR857691.1|GR857691
EST:     AGAGTGAGTGACGCAACCAGACTAGCACGCACAACACACAATAACTGCAT                         ATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCAGAGACTCCTATAAAC
genomic: AGAGTGAGTGACGCAACCAGACTAGCACGCACAACACACAATAACTGCATgtaagataga ... tttgatttagATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCAGAGACTCCTATAAAC
EST: gi|298191598|gb|HO039077.1|HO039077
EST:     AGAGTGAGTGACGCAACCAGACTAGCACGCACAACACACAATAACTGCAT                         ATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCAGAGACTCCTATAAAC
genomic: AGAGTGAGTGACGCAACCAGACTAGCACGCACAACACACAATAACTGCATgtaagataga ... tttgatttagATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCAGAGACTCCTATAAAC
EST: gi|4297788|gb|AI442668.1|AI442668
EST:     AGAGTGAGTGACGCAACCAGACTAGCACGCACAACACACAATAACTGCAT                         ATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCAGAGACTCCTATAAAC
genomic: AGAGTGAGTGACGCAACCAGACTAGCACGCACAACACACAATAACTGCATgtaagataga ... tttgatttagATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCAGAGACTCCTATAAAC