1 5' 3' | 2 5' 3' | 3 5' 3' |
GTCTCCAGGTCCTGTTGTCGACGCTTCCCCTGAGGTTGAAGCAGAGCAACAACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAGgtttttaatttcgattttttctgtttattgtgtttagggtttagggtttcttgggttggactcgtttctgttcaagtttcttgtctcatttccgtgattgctgtcag
species | Glycine max |
transcript | GLYMA06G14250.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAG GAGGATGATGCTCCCGTTGTCGAGGACGTGCGGGATGATGAACAAGGACGAEST: gi|207702278|gb|GD683033.1|GD683033
genomic: AACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAGgtttttaatt ... ttgctgtcagGAGGATGATGCTCCCGTTGTCGAGGACGTGAGGGATGATGA-CAAGGACGA
EST: AACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAG GAGGATGATGCTCCCGTTGTCGAGEST: gi|193635180|gb|FK580727.1|FK580727
genomic: AACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAGgtttttaatt ... ttgctgtcagGAGGATGATGCTCCCGTTGTCGAG
EST: AACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAG GAGGATGATGCTCCCGTTGTCGAGGACGTGCGGGATGATGACAAGGACGACEST: gi|193724375|gb|FK657635.1|FK657635
genomic: AACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAGgtttttaatt ... ttgctgtcagGAGGATGATGCTCCCGTTGTCGAGGACGTGAGGGATGATGACAAGGACGAC
EST: AACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAG GAGGATGATGCTCCCGTTGTCGAGGACGTGCGGGATGATGACAAGGACGAC
genomic: AACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAGgtttttaatt ... ttgctgtcagGAGGATGATGCTCCCGTTGTCGAGGACGTGAGGGATGATGACAAGGACGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTCCAGGTCCTGTTGTCGACGCTTCCCCTGAGGTTGAAGCAGAGCAACAACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAGgtttttaatttcgattttttctgtttattgtgtttagggtttagggtttcttgggttggactcgtttctgttcaagtttcttgtctcatttccgtgattgctgtcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA