1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TCTTCTTCTCAGCTGCAAGGTCCAAAAAGTCAGTGTAGTGAAAACAGACGATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaaaacctttctctctgtcaaacacaccaatttctctctctctctctctctctttttcctttctggggttttaaggttgtttgcttttgtatctcaatctccag
species | Glycine max |
transcript | GLYMA06G14050.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATCCGAAGAATATTACCCCCTTCCATCTCTCTCTATAACATTATTCATAA GTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAGEST: gi|22541215|gb|BU091058.1|BU091058
genomic: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaa ... caatctccagGTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAG
EST: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAA GTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAGEST: gi|208309123|gb|GE108851.1|GE108851
genomic: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaa ... caatctccagGTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAG
EST: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAA GTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAGEST: gi|24135747|gb|BU926257.1|BU926257
genomic: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaa ... caatctccagGTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAG
EST: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAA GTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAGEST: gi|207707299|gb|GD687707.1|GD687707
genomic: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaa ... caatctccagGTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAG
EST: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAA GTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAGEST: gi|22539945|gb|BU089788.1|BU089788
genomic: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaa ... caatctccagGTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAG
EST: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAA GTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAGEST: gi|254324020|gb|GR840445.1|GR840445
genomic: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaa ... caatctccagGTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAG
EST: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAA GTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAGEST: gi|151399022|gb|EV268893.1|EV268893
genomic: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaa ... caatctccagGTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAG
EST: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAA GTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAG
genomic: ATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaa ... caatctccagGTTCAGTTTGATCTTATGTCAATGAAGGATTTTTAGACAAAACCCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTTCTTCTCAGCTGCAAGGTCCAAAAAGTCAGTGTAGTGAAAACAGACGATCCGAAGAATATTACCCTCTTTCATCTCTCTCTATAACATTATTCATAAgtaagataaaaacctttctctctgtcaaacacaccaatttctctctctctctctctctctttttcctttctggggttttaaggttgtttgcttttgtatctcaatctccag
- - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA