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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGAAGGTCCAAAAAGTCAGTGCAGCGAAAACGGACGATCCGAAGAATACCCTTTTCATCTCTCTCTACAATAATCATCCTCTTCCTCTTCAGTAAATTAgtaagataaacctccttctctttcacaaatttcttgtttttccttacatgaataacaaggttaattgataattgttcttttgtggggttttggagtag

Basic information

species Glycine max
transcript GLYMA06G14030.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19345880|gb|BM890760.1|BM890760
EST:     CCTTTTCATCTCTCTCTACAATAATCATCCTCTTCCTCTTCAGTAAATTA                         TTGTACCTGACGATCTTCTCGGTTTGATCTTATATCAATGGAAAATTTTTA
genomic: CCTTTTCATCTCTCTCTACAATAATCATCCTCTTCCTCTTCAGTAAATTAgtaagataaa ... tttggagtagTTGTACCTGACGATCTTCTCGGTTTGATCTTATATCAATGGAAAATTTTTA
EST: gi|208145412|gb|GD941847.1|GD941847
EST:     CCTTTTCATCTCTCTCTACAATAATCATCCTCTTCCTCTTCAGTAAATTA                         TTGTACCTGACGATCTTCTCGGTTTGATCTTATATCAATGGAAAATTTTTA
genomic: CCTTTTCATCTCTCTCTACAATAATCATCCTCTTCCTCTTCAGTAAATTAgtaagataaa ... tttggagtagTTGTACCTGACGATCTTCTCGGTTTGATCTTATATCAATGGAAAATTTTTA
EST: gi|208132667|gb|GD927758.1|GD927758
EST:     CCTTTTCATCTCTCTCTACAATAATCATCCTCTTCCTCTTCAGTAAATTA                         TTGTACCTGACGATCTTCTCG
genomic: CCTTTTCATCTCTCTCTACAATAATCATCCTCTTCCTCTTCAGTAAATTAgtaagataaa ... tttggagtagTTGTACCTGACGATCTTCTCG
EST: gi|213600205|gb|DB964327.1|DB964327
EST:     CCTTTTCATCTCTCTCTACAATAATCATCCTCTTCCTCTTCAGTAAATTA                         TTGTACCTGACGATCTTCTCGGTTTGATCTTATATCAATGGAAAATTTTTA
genomic: CCTTTTCATCTCTCTCTACAATAATCATCCTCTTCCTCTTCAGTAAATTAgtaagataaa ... tttggagtagTTGTACCTGACGATCTTCTCGGTTTGATCTTATATCAATGGAAAATTTTTA