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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAAGCAAAGCAGTCACCACAGAGAGAGAGGTTTTGATGCAACGCTGTCACTGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGgtaagctaagtgttgttgtcaccaaccaaaccaagaatctctttttcgtcgatgcataagaatcacgttttttgttaattcacttttgggggtttgggtt...

Basic information

species Glycine max
transcript GLYMA06G13840.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298166973|gb|HO010412.1|HO010412
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|15812345|gb|BI784620.1|BI784620
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298179275|gb|HO027746.1|HO027746
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|298179275|gb|HO027746.1|HO027746
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|298179275|gb|HO027746.1|HO027746
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|298179275|gb|HO027746.1|HO027746
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|298179275|gb|HO027746.1|HO027746
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|298188314|gb|HO035007.1|HO035007
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|58021022|gb|CX707764.1|CX707764
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|151395904|gb|EV265781.1|EV265781
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|151411570|gb|EV281381.1|EV281381
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|13480888|gb|BG510231.1|BG510231
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|192298890|gb|FG987635.1|FG987635
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298178413|gb|HO024148.1|HO024148
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298175835|gb|HO015240.1|HO015240
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|33388056|gb|CA851263.1|CA851263
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|151411605|gb|EV281416.1|EV281416
EST:     TGAGAAAGGAACTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298167020|gb|HO010459.1|HO010459
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|23056491|gb|BU577734.1|BU577734
EST:     GGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: GGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|209698677|gb|BW652478.1|BW652478
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298164775|gb|HO014420.1|HO014420
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|151403332|gb|EV273142.1|EV273142
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298172528|gb|HO019568.1|HO019568
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298177324|gb|HO027105.1|HO027105
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|151412458|gb|EV282270.1|EV282270
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298179218|gb|HO027689.1|HO027689
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|192298207|gb|FG991697.1|FG991697
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298171175|gb|HO016207.1|HO016207
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298183194|gb|HO028179.1|HO028179
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|11274941|gb|BF325266.1|BF325266
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|192297264|gb|FG990612.1|FG990612
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|192330130|gb|FK020490.1|FK020490
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298188097|gb|HO032054.1|HO032054
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|213601456|gb|DB968744.1|DB968744
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298177693|gb|HO023712.1|HO023712
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298169879|gb|HO018503.1|HO018503
EST:     TGAGAAAGGATCTCTATCTACGGAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298188108|gb|HO032065.1|HO032065
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|58017760|gb|CX704502.1|CX704502
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|8827547|gb|BE211277.1|BE211277
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298169219|gb|HO020579.1|HO020579
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|58021922|gb|CX708663.1|CX708663
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|58021922|gb|CX708663.1|CX708663
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|58021922|gb|CX708663.1|CX708663
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|58021922|gb|CX708663.1|CX708663
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|58021922|gb|CX708663.1|CX708663
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTG                        
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC--TGgtaagctaag ... agtgattaa
EST: gi|23726695|gb|BU761349.1|BU761349
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|192315197|gb|FK010021.1|FK010021
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|192322999|gb|FK016730.1|FK016730
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|13563430|gb|BG551659.1|BG551659
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|21887400|gb|BQ740613.1|BQ740613
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|24135391|gb|BU925901.1|BU925901
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298179784|gb|HO024999.1|HO024999
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|7692200|gb|AW760313.1|AW760313
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|192334282|gb|FK025515.1|FK025515
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298193832|gb|HO040480.1|HO040480
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|213591669|gb|DB969769.1|DB969769
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|254325210|gb|GR838091.1|GR838091
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298193379|gb|HO033813.1|HO033813
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|192327580|gb|FK021285.1|FK021285
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|209697875|gb|BW670105.1|BW670105
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298192773|gb|HO033207.1|HO033207
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|18733709|gb|BM527767.1|BM527767
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298195212|gb|HO043740.1|HO043740
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|12689425|gb|BG155822.1|BG155822
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|31561137|gb|CD486975.1|CD486975
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|21887230|gb|BQ740443.1|BQ740443
EST:     TCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298179008|gb|HO024743.1|HO024743
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|18692776|gb|BM521624.1|BM521624
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|151396003|gb|EV265880.1|EV265880
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298185919|gb|HO031080.1|HO031080
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|8826450|gb|BE210180.1|BE210180
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298183589|gb|HO028802.1|HO028802
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|151400920|gb|EV270734.1|EV270734
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|21601313|gb|BQ611644.1|BQ611644
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298167673|gb|HO012936.1|HO012936
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298168315|gb|HO014490.1|HO014490
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298198562|gb|HO040101.1|HO040101
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|31308233|gb|CD393436.1|CD393436
EST:     TGAGAAAGGATCTCGATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298184032|gb|HO029245.1|HO029245
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|19345849|gb|BM890729.1|BM890729
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|254322284|gb|GR837698.1|GR837698
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|151411522|gb|EV281333.1|EV281333
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298186870|gb|HO033969.1|HO033969
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|8284787|gb|BE022346.1|BE022346
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt
EST: gi|298170122|gb|HO018746.1|HO018746
EST:     TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGTGATTAAG                  
genomic: TGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTC------T--Ggtaagctaag ... agt

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TAAGCAAAGCAGTCACCACAGAGAGAGAGGTTTTGATGCAACGCTGTCACTGAGAAAGGATCTCTATCTACGAAGGAGCGGAATAAAACCCTTCTCTCTGgtaagctaagtgttgttgtcaccaaccaaaccaagaatctctttttcgtcgatgcataagaatcacgttttttgttaattcacttttgggggtttgggtt

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG