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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGGCTCTGTTGAAGGCGGTGGTTGATAACGAGGAACAGATCGTCGACGCTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAGgtactactacttctacttgtcgtgattttgtctttttttctttctcggtgtcttctaatcactagattagaaactaatcttcttgtggttcatgattgta...

Basic information

species Glycine max
transcript GLYMA06G12010.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209699810|gb|BW661120.1|BW661120
EST:     CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAG                         GTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
genomic: CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAGgtactactac ... tgtgttgcagGTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
EST: gi|213616764|gb|DB971261.1|DB971261
EST:     CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAG                         GTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
genomic: CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAGgtactactac ... tgtgttgcagGTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
EST: gi|308098235|gb|HO759976.1|HO759976
EST:     CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAG                         GTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
genomic: CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAGgtactactac ... tgtgttgcagGTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
EST: gi|213595059|gb|DB971862.1|DB971862
EST:     CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAG                         GTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
genomic: CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAGgtactactac ... tgtgttgcagGTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
EST: gi|254317849|gb|GR826833.1|GR826833
EST:     CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAG                         GTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
genomic: CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAGgtactactac ... tgtgttgcagGTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
EST: gi|213591368|gb|DB955716.1|DB955716
EST:     CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAG                         GTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA
genomic: CTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAGgtactactac ... tgtgttgcagGTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAA