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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACACAAACATGAAGACTCGCACCTCTGCCAAAATCTCTGCAACATGGATTCCAATTTTCTCTGTCTTTTCCTTCATTATTGGTATGCTCGTCACAAGCAGgtctcttcctttccctctcttctctgatatcttaacttttcaaattttgtatttttttatctgtgaagttggaaacttgggtttatgggttttgatttgaaaagaatttaaaacattgtttttggtccgatcctggaaatttttctttggggtgcag

Basic information

species Glycine max
transcript GLYMA06G11330.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6341476|gb|AW164300.1|AW164300
EST:     CCAATTTTCTCTGTCTTTTCCTTCATTATTGGTATGCTCGTCACAAGCAG                         GATGTGGGACCCACCAGAATCAAACGGGTTGCTTCTTGCGCAGCATCAGCG
genomic: CCAATTTTCTCTGTCTTTTCCTTCATTATTGGTATGCTCGTCACAAGCAGgtctcttcct ... tggggtgcagGATGTGGGACCCACCAGAATCAAACGGGTTGCTTCTTGCGCAGCATCAGCG
EST: gi|18733482|gb|BM527631.1|BM527631
EST:     CTCGTCACAAGCAG                         GATGTGGGACCCACCAGAATCAAACGGGTTGCTTCTTGCGCAGCATCAGCG
genomic: CTCGTCACAAGCAGgtctcttcct ... tggggtgcagGATGTGGGACCCACCAGAATCAAACGGGTTGCTTCTTGCGCAGCATCAGCG
EST: gi|24136962|gb|BU927472.1|BU927472
EST:     CCAATTTTCTCTGTCTTTTCCTTCATTATTGGTATGCTCGTCACAAGCAG                         GATGTGGGACCCACCAGAATCAAACGGGTTGCTTCTTGCGCAGCATCAGCG
genomic: CCAATTTTCTCTGTCTTTTCCTTCATTATTGGTATGCTCGTCACAAGCAGgtctcttcct ... tggggtgcagGATGTGGGACCCACCAGAATCAAACGGGTTGCTTCTTGCGCAGCATCAGCG