1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATGGCGTCGCAGGAGAGTATCGAAAAGATGCTGTCACGGCAGAATTACCGGAATTTATGGCACACCGATCTCTTGAGATCCATTCAGGCCGATACACCTTgtaaggactctctctctctcacacacacactttttcaattttcggcttcctaatttcacactgacatcgtcttcgaaacacgactttgcgcag
species | Glycine max |
transcript | GLYMA05G37590.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GAATTTATGGCACACCGATCTCTTGAGATCCATTCAGGCCGATACACCTT ATTGTTGCCTCGCGTTGTGGTGEST: gi|7042332|gb|AW472226.1|AW472226
genomic: GAATTTATGGCACACCGATCTCTTGAGATCCATTCAGGCCGATACACCTTgtaaggactc ... ctttgcgcagATTGTTGCCTCGCGTTGTGGTG
EST: GAATTTATGGCACACCGATCTCTTGAGATCCATTCAGGCCGATACACCTT ATTGTTGCCTCGCGTTGTGGTGEST: gi|213620495|gb|DB957339.1|DB957339
genomic: GAATTTATGGCACACCGATCTCTTGAGATCCATTCAGGCCGATACACCTTgtaaggactc ... ctttgcgcagATTGTTGCCTCGCGTTGTGGTG
EST: GAATTTATGGCACACCGATCTCTTGAGATCCATTCAGGCCGATACACCTT ATTGTTGCCTCGCGTTGTGGTG
genomic: GAATTTATGGCACACCGATCTCTTGAGATCCATTCAGGCCGATACACCTTgtaaggactc ... ctttgcgcagATTGTTGCCTCGCGTTGTGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGCGTCGCAGGAGAGTATCGAAAAGATGCTGTCACGGCAGAATTACCGGAATTTATGGCACACCGATCTCTTGAGATCCATTCAGGCCGATACACCTTgtaaggactctctctctctcacacacacactttttcaattttcggcttcctaatttcacactgacatcgtcttcgaaacacgactttgcgcag
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