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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAATGGCTGCGAAACGGTTTTTTGATGATTCTGATCAAGACAATAATAAGCCACCAGGCGATAAACGGATGAGAACTACACCAAGACCTTCTTTTGCTTCgtatgtttaaccaaacttgatttatcaagttattttattttgatatcatatatatgtaaaacttgttactatttatgcttaatttcaaaattaattatgtctcgccacttatcatgtagtataaattaaaccaattcaatcttcttgacatgacag

Basic information

species Glycine max
transcript GLYMA05G34760.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37997182|gb|CF808771.1|CF808771
EST:     CCACCAGGCGATAAACGGATGAGAACTACACCAAGACCTTCTTTTGCTTC                         GGTAATAGGAGAAGTGGTGATGGTGAAAAACTTGCAGAACCTTTTCTCAGG
genomic: CCACCAGGCGATAAACGGATGAGAACTACACCAAGACCTTCTTTTGCTTCgtatgtttaa ... gacatgacagGGTAATAGGAGAAGTGGTGATGGTGAAAAACTTGCAGAACCTTTTCTCAGG
EST: gi|13562858|gb|BG551078.1|BG551078
EST:     CCACCAGGCGATAAACGGATGAGAACTACACCAAGACCTTCTTTTGCTTC                         GGTAATAGGAGAAGTGGTGATGGTGAAAAACTTGCAGAACCTTTTCTCAGG
genomic: CCACCAGGCGATAAACGGATGAGAACTACACCAAGACCTTCTTTTGCTTCgtatgtttaa ... gacatgacagGGTAATAGGAGAAGTGGTGATGGTGAAAAACTTGCAGAACCTTTTCTCAGG
EST: gi|192300286|gb|FG988793.1|FG988793
EST:     CCACCAGGCGATAAACGGATGAGAACTACACCAAGACCTTCTTTTGCTTC                         GGTAATAGGAGAAGTGGTGATGGTGAAAAACTTGCAGAACCTTTTCTCAGG
genomic: CCACCAGGCGATAAACGGATGAGAACTACACCAAGACCTTCTTTTGCTTCgtatgtttaa ... gacatgacagGGTAATAGGAGAAGTGGTGATGGTGAAAAACTTGCAGAACCTTTTCTCAGG