1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GGGTTTGTGTTGGCCGTGCTTTCCAGCGCTTTCATTGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTCCAACTCGCCAGTGCCAATGGCCCACGTGCCAgtcagcctctctctgctctcacccaactttttcttttctttctttaaaaaaaaaatacatttttctgggaaataatgtttcattcgtggtcgtgttttgcattgtggtttttag
species | Glycine max |
transcript | GLYMA05G33020.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CATCAAGAAAAAGGGTCTCCAACTCGCCAGTGCCAATGGCCCACGTGCCA GTGTTGGTGGCTATGGCTACTTGCTTCAACCTCTCTGGTGGGTCGGAATGAEST: gi|213602237|gb|DB958497.1|DB958497
genomic: CATCAAGAAAAAGGGTCTCCAACTCGCCAGTGCCAATGGCCCACGTGCCAgtcagcctct ... tggtttttagGTGTTGGTGGCTATGGCTACTTGCTTCAACCTCTCTGGTGGGTCGGAATGA
EST: CATCAAGAAAAAGGGTCTCCAACTCGCCAGTGCCAATGGCCCACGTGCCA GTGTTGGTGGCTATGGCTACTTGCTTCAACCTCTCTGGTGGGTCGGAATGA
genomic: CATCAAGAAAAAGGGTCTCCAACTCGCCAGTGCCAATGGCCCACGTGCCAgtcagcctct ... tggtttttagGTGTTGGTGGCTATGGCTACTTGCTTCAACCTCTCTGGTGGGTCGGAATGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGTTTGTGTTGGCCGTGCTTTCCAGCGCTTTCATTGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTCCAACTCGCCAGTGCCAATGGCCCACGTGCCAgtcagcctctctctgctctcacccaactttttcttttctttctttaaaaaaaaaatacatttttctgggaaataatgtttcattcgtggtcgtgttttgcattgtggtttttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA