1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TCACCAGCCGCACCCTTACAACGGTCCCTCCGCCGATGAAGTCTTCGCCAAGCGCAAAACGTTCCTCGGTCCTTCCGTCTTCCACTACTATAAGAAACCTgtgagtctccgaaatcgacaccgaccaccttagcatccccgaaaccttttctatttcctttcttcttctttttctttttttttgttttttgttttcgcgt...
species | Glycine max |
transcript | GLYMA05G31630.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGCGCAAA-CGTTCCTCGGTCCTTCCGTCTTCCACTACTATAAGAAACCT CTGAATATCGTGGAEST: gi|208302368|gb|GE100427.1|GE100427
genomic: AGCGCAAAACGTTCCTCGGTCCTTCCGTCTTCCACTACTATAAGAAACCTgtgagtctcc ... gtgtgtgtagCTGAATATCGTGGA
EST: CCGTCTTCCACTACTATAAGAAACCT CTGAATATCGTGGAAGGGAAGATGCAATATCTTTATGATGATAGTGGGAGGEST: gi|208029480|gb|GD827896.1|GD827896
genomic: CCGTCTTCCACTACTATAAGAAACCTgtgagtctcc ... gtgtgtgtagCTGAATATCGTGGAAGGGAAGATGCAATATCTTTATGATGATAGTGGGAGG
EST: ACTATAAGAAACCT CTGAATATCGTGGAAAGGAAGATGCAATATCTTTATGATGATAGTGGGAGG
genomic: ACTATAAGAAACCTgtgagtctcc ... gtgtgtgtagCTGAATATCGTGGAAGGGAAGATGCAATATCTTTATGATGATAGTGGGAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCACCAGCCGCACCCTTACAACGGTCCCTCCGCCGATGAAGTCTTCGCCAAGCGCAAAACGTTCCTCGGTCCTTCCGTCTTCCACTACTATAAGAAACCTgtgagtctccgaaatcgacaccgaccaccttagcatccccgaaaccttttctatttcctttcttcttctttttctttttttttgttttttgttttcgcgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA