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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTTTGAGCCATTATTACCTCGCCAATTCAGCTGCAGAAGATCGTATTCCTCGCGTTGTGACGCCGTTTCCCGCGCCAAAGATAACGGACCTTCCTCAGgtattccattgctgttattttttttttctgtccattttcgataatttaatgattttggcgtacgtgaagaaagaagaatgacttggttggcgttgttgcag

Basic information

species Glycine max
transcript GLYMA05G27890.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213605478|gb|DB964617.1|DB964617
EST:     CTCGCGTTGTGACGCCGTTTCCCGCGCCAAAGATAACGGACCTTCCTCAG                         TTTGAAGGTGAGCACAAAGAGAGTTTGTATTGTGGAACTTATCGTCCTCAG
genomic: CTCGCGTTGTGACGCCGTTTCCCGCGCCAAAGATAACGGACCTTCCTCAGgtattccatt ... gttgttgcagTTTGAAGGTGAGCACAAAGAGAGTTTGTATTGGGGAACTTATCGTCCTCAG
EST: gi|213587163|gb|DB959542.1|DB959542
EST:     CTCGCGTTGTGACGCCGTTTCCCGCGCCAAAGATAACGGACCTTCCTCAG                         TTTGAAGGTGAGCACAAAGAGAGTTTGTATTGGGGAACTTATCGTCCTCAG
genomic: CTCGCGTTGTGACGCCGTTTCCCGCGCCAAAGATAACGGACCTTCCTCAGgtattccatt ... gttgttgcagTTTGAAGGTGAGCACAAAGAGAGTTTGTATTGGGGAACTTATCGTCCTCAG