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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTCCTCGAGAGACTGAAAGACTACGGTCAAGAAGACGCTTTCGCCCTCTGGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAGgtaagttttattccttcctatccaattccctctcttctcctccaaattcgcctccgattcgagttcggaacttcagatttgcgaatcgtattcgtctcattttccaatttcggatcgttttgacctccttattgcgtgatttttgtttctgttttgtttaattaatctgttgcatgttgcag

Basic information

species Glycine max
transcript GLYMA05G26240.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151393104|gb|EV262979.1|EV262979
EST:     GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAG                         AGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
genomic: GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAGgtaagtttta ... catgttgcagAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
EST: gi|213611573|gb|DB960853.1|DB960853
EST:     GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAG                         AGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
genomic: GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAGgtaagtttta ... catgttgcagAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
EST: gi|254340891|gb|GR854619.1|GR854619
EST:     GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAG                         AGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
genomic: GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAGgtaagtttta ... catgttgcagAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
EST: gi|298181983|gb|HO026158.1|HO026158
EST:     GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAG                         AGTTTAGATCTTTCGAGAATTGATCGGATTATTCGGTGCTCGCTGCGATCT
genomic: GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAGgtaagtttta ... catgttgcagAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
EST: gi|254346278|gb|GR859891.1|GR859891
EST:     GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAG                         AGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
genomic: GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAGgtaagtttta ... catgttgcagAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
EST: gi|213600098|gb|DB964304.1|DB964304
EST:     GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAG                         AGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
genomic: GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAGgtaagtttta ... catgttgcagAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
EST: gi|298168261|gb|HO014436.1|HO014436
EST:     GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAG                         AGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT
genomic: GGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAGgtaagtttta ... catgttgcagAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCT