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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAACCACACATTAACATCACCTTCCTATGCACCACCAATAAGCTCCAGACCTTCTAATTCTCTACTCTCTCACTTCTTTCTATCACATTTTACTTGCAAGgtatgtatgtgcatttttctttttcttttcttttttttttgttgcattttttcatgtctttaatgttatgtctattccttgattattgttttagtaactt...

Basic information

species Glycine max
transcript GLYMA05G26230.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213607086|gb|DB957062.1|DB957062
EST:     CTTCTAATTCTCTACTCTCTCACTTCTTTCTATCACATTTTACTTGCAAG                         ATGGCAGCGTCATCAGCATGCCTTGTAGGGAATGGTTTATCTACACGGGGT
genomic: CTTCTAATTCTCTACTCTCTCACTTCTTTCTATCACATTTTACTTGCAAGgtatgtatgt ... gttgatgcagATGGCAGCGTCATCAGCATGCCTTGTAGGGAATGGTTTATCTACACGGGGT
EST: gi|209703854|gb|BW670736.1|BW670736
EST:     CTTCTAATTCTCTACTCTCTCACTTCTTTCTATCACATTTTACTTGCAAG                         ATGGCAGCGTCATCAGCATGCCTTGTAGGGAATGGTTTATCTACACGGGGT
genomic: CTTCTAATTCTCTACTCTCTCACTTCTTTCTATCACATTTTACTTGCAAGgtatgtatgt ... gttgatgcagATGGCAGCGTCATCAGCATGCCTTGTAGGGAATGGTTTATCTACACGGGGT
EST: gi|209722322|gb|BW665819.1|BW665819
EST:     CTTCTAATTCTCTACTCTCTCACTTCTTTCTATCACATTTTACTTGCAAG                         ATGGCAGCGTCATCAGCATGCCTTGTAGGGAATGGTTTATCTACACGGGGT
genomic: CTTCTAATTCTCTACTCTCTCACTTCTTTCTATCACATTTTACTTGCAAGgtatgtatgt ... gttgatgcagATGGCAGCGTCATCAGCATGCCTTGTAGGGAATGGTTTATCTACACGGGGT