1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TCCGAAGCTAAAAGAGGTTTCTCAGCTCTTCGATCGCTTTAAGGCTTCGTTTATCAGGAACGACTTTGATACCTGTTCCAATCTCCTTTCTCAGCTAAAGgtatttcccacccaaccaaaccctaatttacttgttacactaaatttcttttttgcttctcgttcgttgaagatcggttctgttgttttaattacttttt...
species | Glycine max |
transcript | GLYMA05G25730.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTATCAGGAACGACTTTGATACCTGTTCCAATCTCCTTTCTCAGCTAAAG GTGTTACTTACAGGTTTCAGAAGCCTTCCACCGTTGTTTGCAGATACACCTEST: gi|193352377|gb|FK316773.1|FK316773
genomic: TTATCAGGAACGACTTTGATACCTGTTCCAATCTCCTTTCTCAGCTAAAGgtatttccca ... ttactttcagGTGTTACTTACAGGTTTCAGAAGCCTTCCACCGTTGTTTGCAGATACACCT
EST: TTATCAGGAACGACTTTGATACCTGTTCCAATCTCCTTTCTCAGCTAAAG GTGTTACTTACAGGTTTCAGAAGCCTTCCACCGTTGTTTGCAGATACACCT
genomic: TTATCAGGAACGACTTTGATACCTGTTCCAATCTCCTTTCTCAGCTAAAGgtatttccca ... ttactttcagGTGTTACTTACAGGTTTCAGAAGCCTTCCACCGTTGTTTGCAGATACACCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCGAAGCTAAAAGAGGTTTCTCAGCTCTTCGATCGCTTTAAGGCTTCGTTTATCAGGAACGACTTTGATACCTGTTCCAATCTCCTTTCTCAGCTAAAGgtatttcccacccaaccaaaccctaatttacttgttacactaaatttcttttttgcttctcgttcgttgaagatcggttctgttgttttaattacttttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cccaccc