1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CCACTCGCCCAGCCATGTCCAAGGCGCGTGTCTACACCGATGTCAACGTTCTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGGgtaataatcttcccaaccctgatatattttgtggatttctcgtcttaatttgtttccggagctttctgttatgttatgcttcgatttagacacgattaac...
species | Glycine max |
transcript | GLYMA05G22250.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGG TGATCAAGATGATTATGAGGTTGTGCGCAAAGTGGGAAGGGGAAAGTACAGEST: gi|16346861|gb|BI972456.1|BI972456
genomic: CTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGGgtaataatct ... tctttttcagTGATCAAGATGATTATGAGGTTGTGCGCAAAGTGGGAAGGGGAAAGTACAG
EST: CTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGG TGATCAAGATGATTATGAGGTTGTGCGCAAAGTGGGAAGGGGAAAGTACAGEST: gi|11412767|gb|BF424778.1|BF424778
genomic: CTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGGgtaataatct ... tctttttcagTGATCAAGATGATTATGAGGTTGTGCGCAAAGTGGGAAGGGGAAAGTACAG
EST: CTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGG TGATCAAGATGATTATGAGGTTGTGCGCAAAGTGGGAAGGGGAAAGTACAGEST: gi|254326806|gb|GR836415.1|GR836415
genomic: CTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGGgtaataatct ... tctttttcagTGATCAAGATGATTATGAGGTTGTGCGCAAAGTGGGAAGGGGAAAGTACAG
EST: CTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCGATGGGG TGATCAAGATGATTATGAGGTTGTGCGCAAAGTGGGAAGGGGAAAGTACAG
genomic: CTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGGgtaataatct ... tctttttcagTGATCAAGATGATTATGAGGTTGTGCGCAAAGTGGGAAGGGGAAAGTACAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCACTCGCCCAGCCATGTCCAAGGCGCGTGTCTACACCGATGTCAACGTTCTCCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGGgtaataatcttcccaaccctgatatattttgtggatttctcgtcttaatttgtttccggagctttctgttatgttatgcttcgatttagacacgattaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccaaccc