1 5' 3' | 2 5' 3' | 3 5' 3' |
CCGAGACCGTGATTCTCGACGCCGACGTCCCCACCCTCCCCTCCACCGCTTCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGgttcgtgccttcttctccctattttcagattctaatttataattacttcatcggtccccgaacaacggtgattccgatgaatcacaatcatctcggaacc...
species | Glycine max |
transcript | GLYMA05G20940.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTG GTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAGEST: gi|298182453|gb|HO026628.1|HO026628
genomic: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGgttcgtgcct ... ttgcgaacagGTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAG
EST: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTG GTACTCAATCACGAAGGCAEST: gi|298165463|gb|HO011512.1|HO011512
genomic: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGgttcgtgcct ... ttgcgaacagGTACTCAATCACGAAGGCA
EST: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTG GTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAGEST: gi|298183137|gb|HO028400.1|HO028400
genomic: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGgttcgtgcct ... ttgcgaacagGTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAG
EST: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTG GTACTCAATCACGAAGGCATTTTGCATTGCTEST: gi|298188815|gb|HO035508.1|HO035508
genomic: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGgttcgtgcct ... ttgcgaacagGTACTCAATCACGAAGGCATTTTGCATTGCT
EST: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTG GTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACNNNNNNNAGEST: gi|58014302|gb|CX701044.1|CX701044
genomic: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGgttcgtgcct ... ttgcgaacagGTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAG
EST: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTG GTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAGEST: gi|15285060|gb|BI468951.1|BI468951
genomic: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGgttcgtgcct ... ttgcgaacagGTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAG
EST: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTG GTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAG
genomic: TCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGgttcgtgcct ... ttgcgaacagGTACTCAATCACGAAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGAGACCGTGATTCTCGACGCCGACGTCCCCACCCTCCCCTCCACCGCTTCCGACGAATTTCGTCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGgttcgtgccttcttctccctattttcagattctaatttataattacttcatcggtccccgaacaacggtgattccgatgaatcacaatcatctcggaacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttctccc