1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GCCTCAGATCTCGCCTCGAGAACATGGATCAGTTGTCGGCGATCAGCGAGGACCTGGCCGAGATCGACGGACACATCGCCGACAATTTCCGCGCCCTATCgtcagaatcttcaccttcttcttctcattcatttcgttttcatgttccattcctacgttgttgttttctgatcggtgtaatgttgttggttgcag
species | Glycine max |
transcript | GLYMA05G05710.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GACCTGGCCGAGATCGACGGACACATCGCCGACAATTTCCGCGCCCTATC AAATGGATTTCAGAAGTTGGAGAAAATTAAGGATTCCAATAGACAGAGCAGEST: gi|208158728|gb|GD956521.1|GD956521
genomic: GACCTGGCCGAGATCGACGGACACATCGCCGACAATTTCCGCGCCCTATCgtcagaatct ... ttggttgcagAAATGGATTTCAGAAGTTGGAGAAAATTAAGGATTCCAATAGACAGACCAG
EST: GACCTGGCCGAGATCGACGGACACATCGCCGACAATTTCCGCGCCCTATC AAATGGATTTCAGAAGTTGGAGAAAATTAAGGATTCCAATAGACAGEST: gi|208170365|gb|GD968410.1|GD968410
genomic: GACCTGGCCGAGATCGACGGACACATCGCCGACAATTTCCGCGCCCTATCgtcagaatct ... ttggttgcagAAATGGATTTCAGAAGTTGGAGAAAATTAAGGATTCCAATAGACAG
EST: GACCTGGCCGAGATCGACGGACACATCGCCGACAATTTCCGCGCCCTATC AAATGGATTTCAGAAGTTGGAGAAAATTAAGGATTCCAATAGACAG
genomic: GACCTGGCCGAGATCGACGGACACATCGCCGACAATTTCCGCGCCCTATCgtcagaatct ... ttggttgcagAAATGGATTTCAGAAGTTGGAGAAAATTAAGGATTCCAATAGACAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCTCAGATCTCGCCTCGAGAACATGGATCAGTTGTCGGCGATCAGCGAGGACCTGGCCGAGATCGACGGACACATCGCCGACAATTTCCGCGCCCTATCgtcagaatcttcaccttcttcttctcattcatttcgttttcatgttccattcctacgttgttgttttctgatcggtgtaatgttgttggttgcag
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