1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CATGGAGATGGAACGCGTCTTCGAATTTCCTCACACTTACATGGATCGTCGCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAGgtaactttttgatcctaaaatctcagatctaatattttttcttctttttcttgcgcttttatcttttctggtgtagatctggtggaatttgtgtagattg...
species | Glycine max |
transcript | GLYMA05G02740.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAG ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAATEST: gi|207784073|gb|GD758383.1|GD758383
genomic: GCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAGgtaacttttt ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
EST: GCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAG ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAATEST: gi|193397072|gb|FK364114.1|FK364114
genomic: GCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAGgtaacttttt ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
EST: GCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAG ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAATEST: gi|207711539|gb|GD692587.1|GD692587
genomic: GCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAGgtaacttttt ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
EST: GCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAG ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAATEST: gi|193364589|gb|FK329290.1|FK329290
genomic: GCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAGgtaacttttt ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
EST: CCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAG ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAATEST: gi|193475996|gb|FK441293.1|FK441293
genomic: CCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAGgtaacttttt ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
EST: CGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAG ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
genomic: CGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAGgtaacttttt ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGGAGATGGAACGCGTCTTCGAATTTCCTCACACTTACATGGATCGTCGCCCGAGAAAGAGAGCGAGATTGGGCTGGGACATCCCTGAAGTTCCCAAGgtaactttttgatcctaaaatctcagatctaatattttttcttctttttcttgcgcttttatcttttctggtgtagatctggtggaatttgtgtagattg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG