1 5' 3' | 2 5' 3' |
GGATATTTTCATGCCGGTTTCTCCTTCACGCGATCAATTGGTCGGGTTTGGCCGCGCCGTTTCCGATTATGGCCTCACCGCTTCTATTTACGATGTCATGgtaatgaaaaaagaaagaaagaaagaaaatgaataaacgctcgttcttagttagtgtatcaacttggttcagtgtcttgcaggttattccttccctgcag...
species | Glycine max |
transcript | GLYMA04G40270.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCCGCGCCGTTTCCGATTATGGCCTCACCGCTTCTATTTACGATGTCATG AATGCTTACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAAEST: gi|192295340|gb|FG985994.1|FG985994
genomic: GCCGCGCCGTTTCCGATTATGGCCTCACCGCTTCTATTTACGATGTCATGgtaatgaaaa ... ccttttgcagAATGCTTACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAA
EST: GCCGCGCCGTTTCCGATTATGGCCTCACCGCTTCTATTTACGATGTCATG AATGCTTACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAA
genomic: GCCGCGCCGTTTCCGATTATGGCCTCACCGCTTCTATTTACGATGTCATGgtaatgaaaa ... ccttttgcagAATGCTTACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATATTTTCATGCCGGTTTCTCCTTCACGCGATCAATTGGTCGGGTTTGGCCGCGCCGTTTCCGATTATGGCCTCACCGCTTCTATTTACGATGTCATGgtaatgaaaaaagaaagaaagaaagaaaatgaataaacgctcgttcttagttagtgtatcaacttggttcagtgtcttgcaggttattccttccctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaagaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttccc