1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AGTGTACCTCTTTGCTTTTTCCCATTGCTTCTAACGTGAGATCTCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCGgtgcgccatgttcttaaaatttgcaattctttctatctttaatttttctgcatttatatttatcactttgtttattctcctcttggatgtaggtgtaggttacaggtttaagggttttgttttcatttag
species | Glycine max |
transcript | GLYMA04G37030.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATTGCAATTGCCTCTTCTCTTCTCCCAGAATCG GTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTCEST: gi|6227844|gb|AW156443.1|AW156443
genomic: ATTGCAATTGCCTCTTCTCTTCTCCCAGAATCGgtgcgccatg ... tttcatttagGTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTC
EST: AGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCG GTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTCEST: gi|192322800|gb|FK014491.1|FK014491
genomic: AGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCGgtgcgccatg ... tttcatttagGTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTC
EST: CTAACGTGAGATCTCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCG GTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTCEST: gi|8827593|gb|BE211323.1|BE211323
genomic: CTAACGTGAGATCTCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCGgtgcgccatg ... tttcatttagGTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTC
EST: TCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCG GTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTCEST: gi|208186300|gb|GD984605.1|GD984605
genomic: TCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCGgtgcgccatg ... tttcatttagGTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTC
EST: CTAACGTGAGATCTCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCG GTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTCEST: gi|208061415|gb|GD860109.1|GD860109
genomic: CTAACGTGAGATCTCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCGgtgcgccatg ... tttcatttagGTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTC
EST: CTAACGTGAGATCTCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCG GTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTC
genomic: CTAACGTGAGATCTCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCGgtgcgccatg ... tttcatttagGTCACTAATCCGATATCATGAAGCTCGATACGACTAGTCTCGAATCGTTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTGTACCTCTTTGCTTTTTCCCATTGCTTCTAACGTGAGATCTCAGATTGCAATTGCCTCTTCTCTTCTCCCAGAATCGgtgcgccatgttcttaaaatttgcaattctttctatctttaatttttctgcatttatatttatcactttgtttattctcctcttggatgtaggtgtaggttacaggtttaagggttttgttttcatttag
- - - - - - - - - - - - - - - - - - GAGATC