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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TATAAGGCATGGCTTTCCTCCGAAACCGTGTTACCTGTCTATTGTGTTGATCCTCGACTCTTTGCCACTACTTATCATTTCGGCTTTCCGAAAACCGGTGgtaccgttatataacttatattcattcacctttttttttctgggccaaatttagatgttgttccttcaatacaaagttaagtcaaatacagtttcttaag...

Basic information

species Glycine max
transcript GLYMA04G07870.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213608623|gb|DB967126.1|DB967126
EST:     TCCTCGACTCTTTGCCACTACTTATCATTTCGGCTTTCCGAAAACCGGTG                         CATTGAGAGCGCAATTTCTCCTTGAATGCTTGGCTGACTTGAGGAAGAATT
genomic: TCCTCGACTCTTTGCCACTACTTATCATTTCGGCTTTCCGAAAACCGGTGgtaccgttat ... ttgtgtgcagCATTGAGAGCGCAATTTCTCCTTGAATGCTTGGCTGACTTGAGGAAGAATT
EST: gi|213602218|gb|DB958478.1|DB958478
EST:     TCCTCGACTCTTTGCCACTACTTATCATTTCGGCTTTCCGAAAACCGGTG                         CATTGAGAGCGCAATTTCTCCTTGAATGCTTGGCTGACTTGAGGAAGAATT
genomic: TCCTCGACTCTTTGCCACTACTTATCATTTCGGCTTTCCGAAAACCGGTGgtaccgttat ... ttgtgtgcagCATTGAGAGCGCAATTTCTCCTTGAATGCTTGGCTGACTTGAGGAAGAATT