1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CCTCTTCTCTCTCCTCTCTCTTgtaagataattcttcccgaattcaatcttgttcaaccatggattcggcatctttatgcctttagctgtattatcaatagcaatatctatgtacaaagtttatgtctttttgtgcaaattctgttttagtcccgtgaaattaataaactttcttggggtgttctgtatttatgcag
species | Glycine max |
transcript | GLYMA04G06250.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCTTCTCT-TCC-CTTTCTT AEST: gi|209712192|gb|BW681398.1|BW681398
genomic: CTCTTCTCTCTCCTCTCTCTTgtaagataat ... atttatgcag-
EST: CTCTTCTCT-TCC-CTTTCTT AEST: gi|209712192|gb|BW681398.1|BW681398
genomic: CTCTTCTCTCTCCTCTCTCTTgtaagataat ... atttatgcag-
EST: CTCTTCTCT-TCC-CTTTCTT AEST: gi|209722645|gb|BW654652.1|BW654652
genomic: CTCTTCTCTCTCCTCTCTCTTgtaagataat ... atttatgcag-
EST: CTCTTCTCT-TCC-CTTTCTT AEST: gi|209722645|gb|BW654652.1|BW654652
genomic: CTCTTCTCTCTCCTCTCTCTTgtaagataat ... atttatgcag-
EST: CTCTTCTCT-TCC-CTTTCTT AEST: gi|209722645|gb|BW654652.1|BW654652
genomic: CTCTTCTCTCTCCTCTCTCTTgtaagataat ... atttatgcag-
EST: CTCTTCTCT-TCC-CTTTCTT AEST: gi|213618457|gb|DB969399.1|DB969399
genomic: CTCTTCTCTCTCCTCTCTCTTgtaagataat ... atttatgcag-
EST: CTCTTCTCT-TCC-CTTTCTT AEST: gi|213618457|gb|DB969399.1|DB969399
genomic: CTCTTCTCTCTCCTCTCTCTTgtaagataat ... atttatgcag-
EST: CTCTTCTCT-TCC-CTTTCTT AEST: gi|213618457|gb|DB969399.1|DB969399
genomic: CTCTTCTCTCTCCTCTCTCTTgtaagataat ... atttatgcag-
EST: CTCTTCTCT-TCC-CTTTCTT A
genomic: CTCTTCTCTCTCCTCTCTCTTgtaagataat ... atttatgcag-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTCTTCTCTCTCCTCTCTCTTgtaagataattcttcccgaattcaatcttgttcaaccatggattcggcatctttatgcctttagctgtattatcaatagcaatatctatgtacaaagtttatgtctttttgtgcaaattctgttttagtcccgtgaaattaataaactttcttggggtgttctgtatttatgcag
- - - - - CTCCTC