Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|192311930|gb|FK004547.1|FK004547EST: AGTTGGTAACTTTGGAGGAAGTAGCACCCACTTTGAAGAGTCTTCTAGCA GAGACGTTGGCAATGAACGTGAGAAGAAGGAAGTCAGAGATAGAGTTGCAT
genomic: AGTTGGTAACTTTGGAGGAAGTAGCACCCACTTTGAAGAGTCTTCTAGCAgtaagccacg ... tgtgtcgtagGAGACGTTGGCAATGAACGTGAGAAGAAGGAAGTCAGAGATAGAGTTGCAT
EST:
gi|192311929|gb|FK004546.1|FK004546EST: AGTTGGTAACTTTGGAGGAAGTAGCACCCACTTTGAAGAGTCTTCTAGCA GAGACGTTGGCAATGAACGTGAGAAGAAGGAAGTCAGAGATAGAGTTGCAT
genomic: AGTTGGTAACTTTGGAGGAAGTAGCACCCACTTTGAAGAGTCTTCTAGCAgtaagccacg ... tgtgtcgtagGAGACGTTGGCAATGAACGTGAGAAGAAGGAAGTCAGAGATAGAGTTGCAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAATCATTTGTTTCGGGGCATGTCTTCAGCCATAACAATCAAGCCAATGAAGTTGGTAACTTTGGAGGAAGTAGCACCCACTTTGAAGAGTCTTCTAGCAgtaagccacgttcctgaattgaaatttgtttaatttactttgtaatcttatacaaagcatgcaacagagataagcatcttctcataattttgcttttcttgacttctacgtcattggttgtgtcgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA