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ACTGTGCGCTGCGGTTAGAAGAGATTCAATCTGAATCTGAATGGAAGCTATCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAGgttccttcaatttctctctcagtaaaacctatttcatttgccagatctttctccgatcaccaaaaatagatacatcaacgcaattacaggccttttaaat...
species | Glycine max |
transcript | GLYMA04G01100.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAG GCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGATCAGATAATATGEST: gi|18039567|gb|BM307861.1|BM307861
genomic: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAGgttccttcaa ... ttctattcagGCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGATCAGATAATATG
EST: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAG GCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGTTCAGATAATATGEST: gi|298187568|gb|HO034717.1|HO034717
genomic: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAGgttccttcaa ... ttctattcagGCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGATCAGATAATATG
EST: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAG GCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGATCAGATAATATGEST: gi|5126412|gb|AI748148.1|AI748148
genomic: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAGgttccttcaa ... ttctattcagGCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGATCAGATAATATG
EST: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAG GCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGATCAGATAATATGEST: gi|16347039|gb|BI972634.1|BI972634
genomic: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAGgttccttcaa ... ttctattcagGCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGATCAGATAATATG
EST: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAG GCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGATCAGATAATATG
genomic: TCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAGgttccttcaa ... ttctattcagGCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGATCAGATAATATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTGTGCGCTGCGGTTAGAAGAGATTCAATCTGAATCTGAATGGAAGCTATCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAGgttccttcaatttctctctcagtaaaacctatttcatttgccagatctttctccgatcaccaaaaatagatacatcaacgcaattacaggccttttaaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctttctcc